miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|282749163|gb|GW302750.1|GW302750 GATAGTGGAGCTGCCTACTCTGGACGATCTGAAAGTGCAGGAGGTGAAAGTCAGTTCTTCGGTGCTCAAAGCTGCCGCCC
ATCACTATGGAGTTCAGTGTGATAAGTCCAACAAGGAGTTCATGCTCTGCCGCTGGGAAGAGAAAGACCCCAGGCGGTGT
TTAGAGGAAGGCAAGCTCGTCAACAAGTGTGCTCTGGACTTCTTCAGGCAGATAAAGCTTCACTGCGCGGAGCCTTTTAC
AGACTACTGGACCTGCATCGATTATTCCAGCCTGCAGCTGTTCCGTCGCTGTCGCACACAGCAGGCCAAGTTCGACGAGT
GTGTGCTGGACAAACTGGGCTGGGTGCGACCTGACCTGGGAGAGCTGTCCAAGGTCACCAAAGTGAAAACAGATCGACCT
TTACCGGAGAATCCCTATCACTCAAGAGCAAGACCAGAGCCCAACCCTGAGACAGAAAGAGAGCTGAGCCTGCCAGACAT
GGCAGCCGCCTTTTTTTCTGGACCATGTAAAGATGGGTCCGTGGCCCACACTCAGTCACACGCCC




Most similar to sp|P42029|NDUA8_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P42029|NDUA8_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 8 OS=Bos taurus GN=NDUFA8 PE=1 SV=2
          Length = 172

 Score =  303 bits (777), Expect = 3e-82
 Identities = 140/155 (90%), Positives = 148/155 (95%)
 Frame = +2

Query: 2   IVELPTLDDLKVQEVKVSSSVLKAAAHHYGVQCDKSNKEFMLCRWEEKDPRRCLEEGKLV 181
           IVELP+L+DLKVQEVKVSSSVLKAAAHHYG QCDK NKEFMLCRWEEKDPRRCLEEGKLV
Sbjct: 4   IVELPSLEDLKVQEVKVSSSVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLV 63

Query: 182 NKCALDFFRQIKLHCAEPFTDYWTCIDYSSLQLFRRCRTQQAKFDECVLDKLGWVRPDLG 361
           N+CAL+FFRQIK HCAEPFT+YWTCIDYS LQLFRRCR QQA+FDECVLDKLGWVRPDLG
Sbjct: 64  NQCALEFFRQIKRHCAEPFTEYWTCIDYSGLQLFRRCRKQQAQFDECVLDKLGWVRPDLG 123

Query: 362 ELSKVTKVKTDRPLPENPYHSRARPEPNPETEREL 466
           +LSKVTKVKTDRPLPENPYHSRARPEPNPE E +L
Sbjct: 124 DLSKVTKVKTDRPLPENPYHSRARPEPNPEVEGDL 158